Table S1. The exact numbers and genomic coordinates of miRNAs predicted by miRRim
| # of the total prediction |
# of detected miRNA (coverage) |
transition penaltya) |
genomic coordinates |
| 118 |
97 |
-400 | GFF |
| 177 |
132 |
-350 | GFF |
| 271 |
167 |
-300 | GFF |
| 335 |
183 |
-275 | GFF |
| 427 |
198 |
-250 | GFF |
| 491 |
206 |
-240 | GFF |
| 545b) |
212 |
-233 | GFF |
| 594 |
217 |
-227 | GFF |
| 846 |
227 |
-200 | GFF |
| 1236 |
238 |
-175 | GFF |
| 2195 |
245 |
-150 | GFF |
| 4791 |
264 |
-100 | GFF |
a) 'transition penalty' is a parameter that controls transition
probability from non-miRNA models to a miRNA model.
b) prediction result discussed in main text